Publikationen 2021- 2020

2021

Aguilar C, Alves da Silva M, Saraiva M, Neyazi M, Olsson IAS, Bartfeld S (2021)
Organoids as host models for infection biology - a review of methods 
Experimental & Molecular Medicine 53(10):1471-1482

Bartfeld S (2021)
Realizing the potential of organoids-an interview with Hans Clevers
J Mol Med (Berl) 99(4):443-447

Bauer M, Nascakova Z, Mihai AI, Cheng PF, Levesque MP, Lampart S, Hurwitz R, Pfannkuch L, Dobrovolna J, Jacobs M, Bartfeld S, Dohlman A, Shen X, Gall AA, Salama NR, Töpfer A, Weber A, Meyer TF, Janscak P, Müller A (2020)
The ALPK1/TIFA/NF-κB axis links a bacterial carcinogen to R-loop-induced replication stress
Nature Communications 11(1):5117

Bernhardt L, Dittrich M, El‑Merahbi R, Saliba AE, Müller T, Sumara G, Vogel J, Nichols‑Burns S, Mitchell, Haaf T, El Hajj N (2021)
A genome‑wide transcriptomic analysis of embryos fathered by obese males in a murine model of diet‑induced obesity
Scientific Reports 11(1):1979

Campa AR, Smith LM, Hampton HG, Sharma S, Jackson SA, Bischler T, Sharma CM, Fineran PC (2021)
The Rsm (Csr) post-transcriptional regulatory pathway coordinately controls multiple CRISPR-Cas immune systems
Nucleic Acids Research 49(16):9508-9525

El Mouali Y, Gerovac M, Mineikaitė R, Vogel J (2021)
In vivo targets of Salmonella FinO include a FinP-like small RNA controlling copy number of a cohabitating plasmid
Nucleic Acids Research 49(9):5319-5335

El Mouali Y, Ponath F, Scharrer V, Wenner N, Hinton JCD, Vogel J (2021)
Scanning mutagenesis of RNA-binding protein ProQ reveals a quality control role for the Lon protease
RNA 27(12):1512-1527

Fuchs M, Lamm-Schmidt V, Sulzer J, Ponath F, Jenniches L, Kirk JA, Fagan RP, Barquist L, Vogel J, Faber F (2021)
An RNA-centric global view of Clostridioides difficile reveals broad activity of Hfq in a clinically important gram-positive bacterium
PNAS 22;118(25):e2103579118

Fulde M*, van Vorst K*, Zhang K, Westermann AJ, Busche T, Huei YC, Welitschanski K, Froh I, Pägelow D, Johanna Plend, Pfarrer C, Kalinowski J, Vogel J, Weigand PV, Hensel M, Tedin K, Repnik U, Hornef MW (2021)
SPI2 T3SS effectors facilitate enterocyte apical to basolateral transmigration of Salmonella containing vacuoles in vivo
Gut Microbes 13(1):1973836

Gelhausen R, Heyl F, Svensson SL, Froschauer K, Hadjeras L, Sharma CM, Eggenhofer F, Backofen R (2021)
HRIBO - Workflow for high-throughput analysis of prokaryotic ribosome profiling experiments
Bioinformatics 4;37(14):2061-2063

Gerovac M, Vogel J, Smirnov A (2021)
The world of stable ribonucleoproteins and its mapping with Grad-seq and related approaches
Frontiers in Molecular Biosciences 7;8:661448

Gerovac M, Wicke L, Chihara K, Schneider C, Lavigne R, Vogel J (2021)
A Grad-seq View of RNA and Protein Complexes in Pseudomonas aeruginosa under Standard and Bacteriophage Predation Conditions
mBio 9;12(1):e03454-20

Hör J, Vogel J (2021)
Analysis of the RNA and Protein Complexome by Grad-seq
Methods Mol Biol 2300:183-201

Islam MS, Bandyra KJ, Chao Y, Vogel J, Luisi BF (2021)
Impact of pseudo-uridylation, substrate fold and degradosome organization on the endonuclease activity of RNase E
RNA 27(11):1339-1352

Jiao C, Sharma S†, Dugar G†, Peeck NL, Bischler T, Wimmer F, Yu Y, Barquist L, Schoen C, Kurzai C, Sharma CM*, Beisel CL* † Equally contributing; * Corresponding authors (2021)
Non-canonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9
Science 372(6545):941-948

Klünemann M, Andrejev S, Blasche S, Mateus A, Phapale P, Devendran S, Vappiani J, Simon B, Scott TA, Kafkia E, Konstantinidis D, Zirngibl K, Mastrorilli E, Banzhaf M, Mackmull MT, Hövelmann F, Nesme L, Brochado AR, Maier L, Bock T, Periwal V, Kumar M, Kim Y, Tramontano M, Schultz C, Beck M, Hennig J, Zimmermann M, Sévin DC, Cabreiro F, Savitski MM, Bork P, Typas A, Patil KR (2021)
Bioaccumulation of therapeutic drugs by human gut bacteria
Nature 597(7877):533-538

Kayisoglu Ö, Schlegel N, Bartfeld S (2021)
Gastrointestinal epithelial innate immunity-regionalization and organoids as new model
J Mol Med (Berl) 99(4):517-530

Koo BK, Bartfeld S, Alev C (2021)
Organoids: ready for the revolution?
Journal of Molecular Medicine 99(4):441-442

Lamm-Schmidt V, Fuchs M, Sulzer J, Gerovac M, Hör J, Dersch P, Vogel J, Faber F (2021)
Grad-seq identifies KhpB as a global RNA-binding protein in Clostridioides difficile that regulates toxin production
microLife 2:uqab004:10.1093/femsml/uqab004

Liang C, Rios-Miguel AB, Jarick M, Neurgaonkar P, Girard M, François P, Schrenzel J, Ibrahim ES, Ohlsen K, Dandekar T (2021)
Staphylococcusaureus Transcriptome Data and Metabolic Modelling Investigate the Interplay of Ser/Thr Kinase PknB, Its Phosphatase Stp, the glmR/yvcK Regulon and the cdaA Operon for Metabolic Adaptation
Microorganisms 9(10):2148

Marincola G, Jaschkowitz G, Kieninger AK, Wencker FDR, Feßler AT, Schwarz S, Ziebuhr W (2021)
Plasmid-chromosome crosstalk in Staphylococcus aureus: A horizontally acquired transcription regulator controls polysaccharide intercellular adhesin (PIA)-mediated biofilm formation
Front Cell Infect Microbiol 22;11:660702

Masota NE, Vogg G, Ohlsen K, Holzgrabe U (2021)
Reproducibility challenges in the search for antibacterial compounds from nature
PLoS One 16(7):e0255437

Mottola A, Ramírez-Zavala B, Hünniger K, Kurzai O, Morschhäuser J (2021)
The zinc cluster transcription factor Czf1 regulates cell wall architecture and integrity in Candida albicans
Mol Microbiol 116:483-497

Pérez J (2021)
Fungi of the human gut microbiota: Roles and significance
Int J Med Microbiol 311(3):151490

Pernitzsch SR, Alzheimer M, Bremer BU, Robbe-Saule M, de Reuse H, Sharma CM (2021)
Small RNA mediated gradual control of lipopolysaccharide biosynthesis control affects antibiotic resistance in Helicobacter pylori
Nature Communications 12(1):4433

Ponath F, Tawk C, Zhu Y, Barquist L, Faber F, Vogel J (2021)
RNA landscape of the emerging cancer-associated microbe Fusobacterium nucleatum
Nature Microbiology doi: 10.1038/s41564-021-00927-7)

Popella L, Jung J, Popova K, Ðurica-Mitić S, Barquist L, Vogel J (2021)
Global RNA profiles show target selectivity and physiological effects of peptide-delivered antisense antibiotics
Nucleics Acids Research 49(8):4705-4724

Prezza G*, Ryan D*, Mädler G, Reichardt S, Barquist L, Westermann AJ (2021)
Comparative genomics provides structural and functional insights into Bacteroides RNA biology
Molecular Microbiology 117(1):67-85

Ramírez-Zavala B, Mottola A, Krüger I, Morschhäuser J (2021)
A suppressor mutation in the β-subunit Kis1 restores functionality of the SNF1 complex in Candida albicans snf4Δ mutants
mSphere 6:e0092921

Rivera-Calzada A, Famelis N, Llorca O, Geibel S (2021)
Type VII secretion systems: structure, functions and transport models
Nat Rev Microbiol 26. doi: 10.1038

Santos SC, Bischler T, Westermann AJ*, Vogel J* (2021)
MAPS integrates overlooked regulation of actin-targeting effector SteC into the virulence control network of Salmonella small RNA PinT
Cell Reports 34 (5), 108722

Schmidt N, Lareau C, Keshishian H, Ganskih S, Schneider C, Hennig T, Melanson R, Werner S, Wei Y, Zimmer M, Ade J, Kirschner L, Zielinski S, Dölken L, Lander ES, Caliskan N, Fischer U, Vogel J, Carr S, Bodem J, Munschauer M (2021)
The SARS-CoV-2 RNA-protein interactome in infected human cells
Nature Microbiology 6(3):339-353

Sharma S, Sharma CM (2021)
Identification of RNA Binding Partners of CRISPR-Cas Proteins in Prokaryotes Using RIP-Seq
Methods in Molecular Biology 2404:111-133

Stelzner K, Boyny A, Hertlein T, Sroka A, Moldovan A, Paprotka K, Kessie D, Mehling H, Potempa J, Ohlsen K, Fraunholz MJ, Rudel T (2021)
Intracellular Staphylococcus aureus employs the cysteine protease staphopain A to induce host cell death in epithelial cells
PLoS pathogens 17(9):e1009874

Svensson SL, Sharma CM (2021)
RNase III-mediated processing of a trans-acting bacterial sRNA and its cis-encoded antagonist
eLife doi.org/10.7554/eLife.69064

Svensson SL, Sharma CM (2021)
Small RNAs that target G-rich sequences are generated by diverse biogenesis pathways in Epsilonproteobacteria
Molecular Microbiology 117(1):215-233

Tiffany CR, Lee JY, Rogers AWL, Olsan EE, Morales P, Faber F*, Baumler A* (2021)
The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum.
Microbiome 19;9(1):174

Wallaschek N, Reuter S, Silkenat S, Wolf K, Niklas C, Kayisoglu Ö, Aguilar C, Wiegering A, Germer CT, Kircher S, Rosenwald A, Shannon-Lowe C, Bartfeld S (2021)
Ephrin receptor A2, the epithelial receptor for Epstein-Barr virus entry, is not available for efficient infection in human gastric organoids
PLoS Pathogens 17(2):e1009210

Wencker FDR, Marincola G, Schoenfelder SMK, Maaß S, Becher D, Ziebuhr W (2021)
Another layer of complexity in Staphylococcus aureus methionine biosynthesis control: Unusual RNase III-driven T-box riboswitch cleavage determines met operon mRNA stability and decay
Nucleic Acids Research doi: 10.1093/nar/gkaa1277. Online ahead of print

Westermann AJ, Kruck D, Hintzsche H (2021)
Aktuell
Biospektrum 27, 60-61

Westermann AJ, Vogel J (2021)
Cross-species RNA-seq for deciphering host-microbe interactions
Nat Rev Genet 22(6):361-378 Review

Wicke L, Ponath F, Coppens L, Gerovac M, Lavigne R, Vogel J (2021)
Introducing differential RNA-seq mapping to track the early infection phase for Pseudomonas phage ɸKZ
RNA Biology 18(8):1099-1110

2020

Aguilar C, Cruz AR, Rodrigues Lopes I, Maudet C, Sunkavalli U, Silva RJ, Sharan M, Lisowski C, Zaldívar-López S, Garrido JJ, Giacca M, Mano M, Eulalio A (2020)Functional screenings reveal different requirements for host microRNAs in Salmonella and Shigella infectionNature Microbiology 5(1):192-205. doi: 10.1038/s41564-019-0614-3

Alzheimer M, Svensson SL, König F, Schweinlin M, Metzger M, Walles H, Sharma CM  (2020)
A three-dimensional intestinal tissue model reveals factors and small regulatory RNAs important for colonization with Campylobacter jejuni
PLoS Pathogen 18;16(2):e1008304. doi: 10.1371/journal.ppat.1008304

Banchenko. S, Weise C, Lanka E, Saenger W, Geibel S (2020)
The helix bundle domain of primase RepB’ is required for dinucleotide formation and extension
bioRxiv doi: https://doi.org/10.1101/2020.02.20.955914

Barthels F, Marincola G, Marciniak T, Konhauser M, Hammerschmidt S, Bierlmeier J, Distler U, Wich PR, Tenzer S, Schwarzer D, Ziebuhr W, & Schirmeister T (2020)
Asymmetric Disulfanylbenzamides as Irreversible and Selective Inhibitors of Staphylococcus aureus Sortase A
ChemMedChem 15(10):839-850

Bauriedl S, Gerovac M, Heidrich N, Bischler T, Barquist L, Vogel J, Schoen C (2020)
The minimal meningococcal ProQ protein has an intrinsic capacity for structure-based global RNA recognition
Nature Communications 11(1):2823

Chumduri C, Gurumurthy RK, Berger H, Dietrich O, Kumar N, Koster S, Brinkmann V, Hoffmann K, Drabkina M, Arampatzi P, Son D, Klemm U, Mollenkopf HJ, Herbst H, Mangler M, Vogel J, Saliba AE, Meyer TF (2020)
Opposing Wnt signals 1 regulate cervical squamocolumnar homeostasis and emergence of metaplasia
Nature Cell Biology 23(2):184-197

Eisenbart SK^#, Alzheimer M^#, Pernitzsch SR, Dietrich S, Stahl S, Sharma CM (2020)
A Repeat-Associated Small RNA Controls the Major Virulence Factors of Helicobacter pylori
Molecular Cell 80(2):210-226.e7

Gerovac M, Mouali YEL, Kuper J, Kisker C, Barquist L, Vogel J (2020)
Global discovery of bacterial RNA-binding proteins by RNase-sensitive gradient profiles reports a new FinO domain protein
RNA 26(10):1448-1463

Hennessen F, Miethke M, Zaburannyi N, Herrmann J, Loose M, Lukežič T, Hüttel S, Jansen R, Schmiedel J, Imirzalioglu C, Vogel J, Westermann AJ, Hesterkamp T, Stadler M, Wagenlehner F, Petković H, Müller R (2020)
Amidochelocardin overcomes resistance mechanisms exerted on tetracyclines and natural chelocardin.
Antibiotics 9(9):E619

Hollenhorst MI, Jurastow I, Nandigama R, Appenzeller S, Li L, Vogel J, Wiederhold S, Althaus M, Empting M, Altmüller J, Hirsch AKH, Flockerzi V, Canning BJ, Saliba AE, Krasteva-Christ G (2020)
Tracheal brush cells release acetylcholine in response to bitter tastants for paracrine and autocrine signaling
FASEB Journal 34(1):316-332

Hör J, Di Giorgio S, Gerovac M, Venturini E, Förstner KU, Vogel J (2020)
Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli
Nuclear Acids Research 48(16):9301-9319

Hör J, Garriss G, Di Giorgio S, Hack LM, Vanselow JT, Förstner KU, Schlosser A, Henriques-Normark B, Vogel J (2020)
Grad-seq in a Gram-positive bacterium reveals exonucleolytic sRNA activation in competence control
EMBO J 39(9):e103852

Hör J, Matera G, Vogel J, Gottesman S, Storz G (2020)
Trans-acting small RNAs and their effects on gene expression in Escherichia coli and Salmonella enterica
EcoSal 9(1):10.1128/ecosalplus.ESP-0030-2019

Huber C, Stamm I, Ziebuhr W, Marincola G, Bischoff M, Strommenger B, Jaschkowitz G, Marciniak T, Cuny C, Witte W, Döllinger J, Schaudinn C, Thürmer A, Epping L, Semmler T, Lübke-Becker A, Wieler LH, & Walther B (2020)
Sillence as a way of niche adaptation: mecC-MRSA with variations in the accessory gene regulator (agr) functionality express kaleidoscopic phenotypes
Scientific Reports 8;10(1):14787

Imdahl F, Vafadarnejad E, Homberger C, Saliba AE*, Vogel J* (2020)
Single-cell RNA-sequencing reports growth-condition-specific global transcriptomes of individual bacteria
Nature Microbiology doi: 10.1038/s41564-020-0774-1. Online ahead of print

Josenhans C, Müthing J, Elling L, Bartfeld S, Schmidt H (2020)
How bacterial pathogens of the gastrointestinal tract use the mucosal glyco-code to harness mucus and microbiota: New ways to study an ancient bag of tricks
Int J Med Microbiology 16:151392. doi: 10.1016/j.ijmm.2020.151392

Kayisoglu O, Weiss F, Niklas C, Pierotti I, Pompaiah M, Wallaschek N, Germer CT, Wiegering A, Bartfeld S (2020)
Location-specific cell identity rather than exposure to GI microbiota defines many innate immune signalling cascades in the gut epithelium
Gut 22:gutjnl-2019-319919. doi: 10.1136

Korkut DN, Alves ID, Vogel A, Chabas S, Sharma CM, Martinez D, Loquet A, Salgado GF, Darfeuille F (2020)
Structural insights into the AapA1 toxin of Helicobacter pylori
Biochim Biophys Acta Gen Subj 1864(1):129423

Mayr EM, Ramírez-Zavala B, Krüger I, Morschhäuser J (2020)
A zinc cluster transcription factor contributes to the intrinsic fluconazole resistance of Candida auris
mSphere 5:e00279-20

Michaux C, Hansen EE, Jenniches L, Gerovac M, Barquist L, Vogel J, (2020)
Single-nucleotide RNA maps for the two major nosocomial pathogens Enterococcus faecalis and Enterococcus faecium
Frontiers in Cellular & Infection Microbiology 25;10:600325

Mietrach N, Damián-Aparicio D, Isupov M, Krupka M, Lopez D, Geibel S (2020)
The conserved core component EsaA mediates bacterial killing by the type VIIb secretion system
Research Square doi: https://doi.org/10.21203/rs.3.rs-95626/v2

Mietrach N, Diana Damián-Aparicio, Mielich-Süß B, Lopez D, Geibel S (2020)
Substrate interaction with the EssC coupling protein of the type VIIb secretion system
Journal Bacteriology pii JB.00646-19

Mika-Gospodorz B*, Giengkam S*, Westermann AJ, Wongsantichon J, Kion-Crosby W, Chuenklin S, Wang LC, Sunyakumthorn P, Sobota RM, Subbian S, Vogel J, Barquist L, Salje J (2020)
Dual RNA-seq provides insight into the biology of the neglected intracellular human pathogen Orientia tsutsugamushi
Nature Communications 11(1):3363

Moreno-Velásquez SD, Tint SH, del Olmo Toledo V, Torsin S, De S, Pérez JC (2020)
The regulatory proteins Rtg1/3 govern sphingolipid homeostasis in the human associated yeast Candida albicans
Cell Reports 30:620-629

Mottola A, Schwanfelder S, Morschhäuser J (2020)
Generation of viable Candida albicans mutants lacking the “essential” protein kinase Snf1 by inducible gene deletion
mSphere 5:e00805-20

Mühlberg E, Umstätter F, Domhan C, Hertlein T, Ohlsen K, Krause A, Kleist C, Beijer B, Zimmermann S, Haberkorn U, Mier W, Uhl P (2020)
Vancomycin-Lipopeptide Conjugates with High Antimicrobial Activity on Vancomycin-Resistant Enterococci
Pharmaceuticals (Basel) 29;13(6):110

Parhi L, Alon-Maimon T, Sol A, Nejman D, Shhadeh A, Fainsod-Levi T, Yajuk O, Isaacson B, Abed J, Maalouf N, Nissan A, Sandbank J, Yehuda-Shnaidman E, Ponath F, Vogel J, Mandelboim O, Granot Z, Straussman R, Bachrach G (2020)
Breast cancer colonization by Fusobacterium nucleatum accelerates tumor growth and metastatic progression
Nature Communications 11(1):3259

Prezza G, Heckel T, Dietrich S, Homberger C, Westermann AJ*, Vogel J* (2020)
Improved bacterial RNA-seq by Cas9-based depletion of ribosomal RNA reads
RNA 26(8):1069-1078

Riedel C, Förstner KU, Püning C, Alter T, Sharma CM, Gölz G (2020)
Differences in the Transcriptomic Response of Campylobacter coli and Campylobacter lari to Heat Stress
Frontier Microbiology 27;11:523

Rajewsky N, Almouzni G, Gorski SA, Aerts S, Amit I, Bertero MG, Bock C, Bredenoord AL, Cavalli G, Chiocca S, Clevers H, De Strooper B, Eggert A, Ellenberg J, Fernández XM, Figlerowicz M, Gasser SM, Hubner N, Kjems J, Knoblich JA, Krabbe G, Lichter P, Linnarsson S, Marine JC, Marioni J, Marti-Renom MA, Netea MG, Nickel D, Nollmann M, Novak HR, Parkinson H, Piccolo S, Pinheiro I, Pombo A, Popp C, Reik W, Roman-Roman S, Rosenstiel P, Schultze JL, Stegle O, Tanay A, Testa G, Thanos D, Theis FJ, Torres-Padilla ME, Valencia A, Vallot C, van Oudenaarden A, Vidal M, Voet T & LifeTime Community (2020)
LifeTime and improving European healthcare through cell-based interceptive medicine
Nature 587(7834):377-386

Ruben S, Garbe E, Mogavero S, Albrecht-Eckardt D, Hellwig D, Häder A, Krüger T, Gerth K, Jacobsen ID, Elshafee O, Brunke S, Hünniger K, Kniemeyer O, Brakhage AA, Morschhäuser J, Hube B, Vylkova S, Kurzai O, Martin R (2020)
Ahr1 and Tup1 contribute to the transcriptional control of virulence-associated genes in Candida albicans
mBio 11:e00206-20

Ryan D, Jenniches L, Reichardt S, Barquist L, Westermann AJ (2020)
A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron
Nature Communications 11(1):3557

Ryan D, Prezza G, Westermann AJ (2020)
An RNA-centric view on gut Bacteroidetes
Biological Chemistry 402(1):55-72

Saedtler M, Förtig N, Ohlsen K, Faber F, Masota N, Kowalick K, Holzgrabe U, Meinel L (2020)
Antibacterial Anacardic Acid Derivatives
ACS Infect Dis 10;6(7):1674-1685

Schulte LN*, Schweinlin M*, Westermann AJ, Janga H, Santos SC, Appenzeller S, Walles H, Vogel J, Metzger M (2020)
An advanced human intestinal co-culture model reveals compartmentalized host and pathogen strategies during Salmonella infection
mBio 11(1). pii: e03348-19

Seelbinder B^#, Wallstabe J^#, Marischen L^#, Weiss E, Wurster S, Page L, Löffler C, Bussemer L, Schmitt A-L, Wolf T, Linde J, Cicin-Sain L, Becker J, Kalinke U, Vogel J, Panagiotou G, Einsele H, Westermann AJ*, Schäuble S*, Löffler J* (2020)
Triple RNA-seq reveals synergy in a human virus-fungus co-infection model
Cell Reports 33(7):108389

Stanifer ML, Mukenhirn M, Muenchau S, Pervolaraki K, Kanaya T, Albrecht D, Odendall C, Hielscher T, Haucke V, Kagan JC, Bartfeld S, Ohno H, Boulant S (2020)
Asymmetric distribution of TLR3 leads to a polarized immune response in human intestinal epithelial cells
Nature Microbiology 5(1):181-191. doi: 10.1038/s41564-019-0594-3

Umstätter F, Domhan C, Hertlein T, Ohlsen K, Mühlberg E, Kleist C, Zimmermann S, Beijer B, Klika KD, Haberkorn U, Mier W, Uhl P (2020)
Vancomycin Resistance Is Overcome by Conjugation of Polycationic Peptides
Angew Chem Int Ed Engl 2;59(23):8823-8827

Venturini E, Svensson SL, Maass S, Gelhausen R, Eggenhofer F, Li L, Cain AK, Parkhill J, Becher D, Backofen R, Barquist L, Sharma CM, Westermann AJ, Vogel J (2020)
An integrative global data-driven census of Salmonella small proteins and their potential functions in virulence
microLife 1 (1)doi.org/10.1093/femsml/uqaa002

Vogel J (2020)
An RNA biology perspective on species-specific programmable RNA antibiotics
Molecular Microbiology 113(3):550-559

Wang C, Chao Y, Matera G, Gao Q, Vogel J (2020)
The conserved 3’ UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration
Nucleic Acids Research 48(4):2126-2143

Westmeier D, Posselt G, Hahlbrock A, Bartfeld S, Vallet C, Abfalter C, Docter D, Knauer SK, Wessler S, Stauber RH (2020)
Correction: Nanoparticle binding attenuates the pathobiology of gastric cancer-associated Helicobacter pylori
Nanoscale 23;12(3):2154-2155. doi: 10.1039/c9nr90287b

Wicke L, Ponath F, Coppens L, Gerovac M, Lavigne R, Vogel J (2020)
Introducing Differential RNA-seq mapping to track the early infection phase for Pseudomonas phage ɸKZ
RNA Biology 18(8):1099-1110

Yasrebi K, Schade N, Adeniyi ET, Wecklein B, Ymeraj A, Hertlein T, Ohlsen K, Suzen S, Lalk M, Ströhl D, Hilgeroth A (2020)
Novel effective antibacterial small-molecules against Staphylococcus and Enterococcus strains
Future Med Chem 12(13):1205-1211