Image Analysis Automation with ImageJ Macro Scripting - VIRTUAL WORKSHOP

Detailed workinar content overview:

• Basic ImageJ macro recording of a general image analysis pipeline
• Basics about variables and macro command and how to use them
• Looping over image files, table data, ROIs
• Interaction between user and macro
• Automatic customized measurements
• Creating and interacting with customized tables
• Automatically creating folders and flexibly saving all data as needed
• Testing conditions and creating automatic macro decisions
• Creating reusable functions
• Creating different customized dialogs for user input
• Making your own ImageJ menu with your own macros
• Optional: tips for individual solutions

All methods are learned hands-on with plenty of practical exercises to get confidence in applying them in your daily work.

Prerequisite:

Prior participation in the BioVoxxel Workshop – “Basic Microscopic Image Processing and Analysis” is mandatory to be able to follow the complete content of this workshop. Participation without prior basic course attendance can only be permitted in exceptional cases in agreement with the trainer and a sound prior knowledge of image processing techniques and ImageJ.

To attend, please register here.

Note: Registration of GSLS/GSST doctoral researchers has priority to non-GSLS/non-GSST participants. Non-GSLS/non-GSST participants pay a service and workshop fee of EUR 50 by bank transfer.